The Molecule class is used to manage and render 3D molecular structures. More...

#include <Molecule.hpp>

Inheritance diagram for vl::Molecule:

Public Member Functions
virtual const char *	className ()
	Returns the name of the class.
	Molecule ()
	~Molecule ()
	Molecule (const Molecule &other)
Molecule &	operator= (const Molecule &other)
void	reset ()
void	setMoleculeName (const String &name)
const String	moleculeName () const
unsigned int	id () const
void	setId (unsigned int id)
KeyValues *	tags ()
const KeyValues *	tags () const
const std::vector< ref< Atom > > &	atoms () const
std::vector< ref< Atom > > &	atoms ()
int	atomCount () const
Atom *	atom (int index) const
void	addAtom (Atom *atom)
void	eraseAtom (Atom *atom)
void	eraseAtom (int index)
void	eraseAllAtoms ()
const std::vector< ref< Bond > > &	bonds () const
std::vector< ref< Bond > > &	bonds ()
int	bondCount () const
Bond *	bond (int index) const
Bond *	bond (Atom a1, Atom a2)
void	addBond (Bond *bond)
Bond *	addBond (Atom a1, Atom a2)
void	eraseBond (Bond *bond)
void	eraseBond (int bond)
void	eraseBond (Atom a1, Atom a2)
void	eraseBond (int a1, int a2)
void	eraseAllBonds ()
void	computeAtomAdjacency ()
void	incidentBonds (std::vector< Bond * > &inc_bonds, Atom *atom)
const std::vector< ref< Atom > > &	cycle (int i) const
	Returns the i-th cycle.
std::vector< ref< Atom > > &	cycle (int i)
	Returns the i-th cycle.
const std::vector< std::vector < ref< Atom > > > &	cycles () const
	Returns the list of cycles.
std::vector< std::vector< ref < Atom > > > &	cycles ()
	Returns the list of cycles.
void	prepareForRendering ()
	Generates the geometry representing the current molecule, atom and bond settings.
const ActorTree *	actorTree () const
	The ActorTree node containing the Actor[s] representing the molecule.
ActorTree *	actorTree ()
	The ActorTree node containing the Actor[s] representing the molecule.
void	setCPKAtomColors ()
	Sets all the atoms' color to their CPK color.
void	setAtomColors (const fvec4 &color)
	Sets all the atoms' color to the specified color.
void	setCalculatedAtomRadii (float percentage=1.0f)
	Sets all the atoms' radii to their calculated atom radii.
void	setEmpiricalAtomRadii (float percentage=1.0f)
	Sets all the atoms' radii to their empirical atom radii.
void	setCovalentAtomRadii (float percentage=1.0f)
	Sets all the atoms' radii to their covalent atom radii.
void	setVanDerWaalsAtomRadii (float percentage=1.0f)
	Sets all the atoms' radii to their van der Waals atom radii.
void	setAtomRadii (float radius)
	Sets all the atoms' radii to the specified one.
void	setBondRadii (float radius)
	Sets all the bonds' radii to the specified one.
void	setAtomTypeVisible (EAtomType type, bool visible)
void	setMoleculeStyle (EMoleculeStyle style)
	The rendering style of the molecule.
EMoleculeStyle	moleculeStyle () const
	The rendering style of the molecule.
void	setAtomDetail (int detail)
	Geometrical detail used to render the atoms, usually between 0 and 3 (default is 2)
int	atomDetail () const
	Geometrical detail used to render the atoms, usually between 0 and 3 (default is 2)
void	setBondDetail (int detail)
	Geometrical detail used to render the bonds, usually between 5 and 50 (default is 20)
int	bondDetail () const
	Geometrical detail used to render the bonds, usually between 5 and 50 (default is 20)
float	ringOffset () const
void	setRingOffset (float offset)
void	setAromaticBondsColor (const fvec4 &color)
void	setAromaticRingColor (const fvec4 &color)
const fvec4 &	aromaticRingColor () const
float	lineWidth () const
bool	smoothLines () const
void	setLineWidth (float w)
void	setSmoothLines (bool smooth)
Transform *	transformTree ()
	The transform tree used by the generated bonds, atoms and labels.
const Transform *	transformTree () const
	The transform tree used by the generated bonds, atoms and labels.
Text *	atomLabelTemplate ()
	The text settings to be used to render the atom labels.
const Text *	atomLabelTemplate () const
	The text settings to be used to render the atom labels.
void	setShowAtomNames (bool show)
	Globally defines whether the atom names should be rendered or not. See also Atom::setShowAtomName().
bool	showAtomNames () const
	Globally defines whether the atom names should be rendered or not. See also Atom::setShowAtomName().
const Effect *	atomLabelEffect () const
	The Effect used to render the atom labels.
Effect *	atomLabelEffect ()
	The Effect used to render the atom labels.
Protected Member Functions
void	prepareAtomInsert (int bonus=100)
void	prepareBondInsert (int bonus=100)
void	wireframeStyle ()
void	atomsStyle ()
void	ballAndStickStyle ()
void	sticksStyle ()
void	generateRings ()
void	generateAtomLabels ()
void	generateAtomLabel (const Atom atom, Transform tr)
Protected Attributes
fvec4	mAromaticRingColor
ref< ActorTree >	mActorTree
ref< Transform >	mTransformTree
std::vector< ref< Atom > >	mAtoms
std::vector< ref< Bond > >	mBonds
std::vector< std::vector< ref < Atom > > >	mCycles
String	mMoleculeName
ref< KeyValues >	mTags
ref< Text >	mAtomLabelTemplate
ref< Effect >	mAtomLabelEffect
unsigned int	mId
EMoleculeStyle	mMoleculeStyle
int	mAtomDetail
int	mBondDetail
float	mRingOffset
float	mLineWidth
bool	mSmoothLines
bool	mShowAtomNames

Detailed Description

The Molecule class is used to manage and render 3D molecular structures.

See also:

Definition at line 64 of file Molecule.hpp.

Constructor & Destructor Documentation

Molecule::Molecule ( )

Definition at line 38 of file Molecule.cpp.

References vl::EN_BLEND, mAtomLabelEffect, reset(), and VL_DEBUG_SET_OBJECT_NAME.

vl::Molecule::~Molecule ( ) [inline]

Definition at line 70 of file Molecule.hpp.

vl::Molecule::Molecule ( const Molecule & other ) [inline]

Definition at line 71 of file Molecule.hpp.

Member Function Documentation

virtual const char* vl::Molecule::className ( ) [inline, virtual]

Returns the name of the class.

Reimplemented from vl::Object.

Definition at line 67 of file Molecule.hpp.

Molecule & Molecule::operator= ( const Molecule & other )

Definition at line 69 of file Molecule.cpp.

References atom(), vl::Bond::atom1(), vl::Bond::atom2(), atoms(), bond(), bonds(), cycle(), mAromaticRingColor, mAtomDetail, mBondDetail, mCycles, mLineWidth, mMoleculeName, mMoleculeStyle, mRingOffset, mSmoothLines, mTags, and reset().

void Molecule::reset ( )

Definition at line 50 of file Molecule.cpp.

References vl::KeyValues::clear(), vl::String::clear(), mActorTree, mAromaticRingColor, mAtomDetail, mAtoms, mBondDetail, mBonds, mCycles, mId, mLineWidth, mMoleculeName, mMoleculeStyle, mRingOffset, vl::MS_BallAndStick, mShowAtomNames, mSmoothLines, and tags().

Referenced by Molecule(), and operator=().

void vl::Molecule::setMoleculeName ( const String & name ) [inline]

Definition at line 76 of file Molecule.hpp.

const String vl::Molecule::moleculeName ( ) const [inline]

Definition at line 77 of file Molecule.hpp.

unsigned int vl::Molecule::id ( ) const [inline]

Definition at line 79 of file Molecule.hpp.

void vl::Molecule::setId ( unsigned int id ) [inline]

Definition at line 80 of file Molecule.hpp.

KeyValues* vl::Molecule::tags ( ) [inline]

Definition at line 82 of file Molecule.hpp.

Referenced by reset().

const KeyValues* vl::Molecule::tags ( ) const [inline]

Definition at line 83 of file Molecule.hpp.

const std::vector< ref<Atom> >& vl::Molecule::atoms ( ) const [inline]

Definition at line 85 of file Molecule.hpp.

Referenced by addAtom(), eraseAtom(), vl::RingExtractor::keepMinimalCycles(), operator=(), setAtomColors(), setAtomRadii(), setAtomTypeVisible(), setCalculatedAtomRadii(), setCovalentAtomRadii(), setCPKAtomColors(), setEmpiricalAtomRadii(), and setVanDerWaalsAtomRadii().

std::vector< ref<Atom> >& vl::Molecule::atoms ( ) [inline]

Definition at line 86 of file Molecule.hpp.

int vl::Molecule::atomCount ( ) const [inline]

Definition at line 88 of file Molecule.hpp.

Referenced by vl::RingExtractor::bootstrap(), and computeAtomAdjacency().

Atom * Molecule::atom ( int index ) const

Definition at line 107 of file Molecule.cpp.

References mAtoms.

Referenced by vl::RingExtractor::bootstrap(), computeAtomAdjacency(), eraseAtom(), eraseBond(), incidentBonds(), operator=(), and setAtomTypeVisible().

void Molecule::addAtom ( Atom * atom )

Definition at line 109 of file Molecule.cpp.

References atoms(), and prepareAtomInsert().

void Molecule::eraseAtom ( Atom * atom )

Definition at line 131 of file Molecule.cpp.

References atom(), atoms(), eraseBond(), and incidentBonds().

void Molecule::eraseAtom ( int index )

Definition at line 122 of file Molecule.cpp.

References atom(), atoms(), eraseBond(), and incidentBonds().

void Molecule::eraseAllAtoms ( )

Definition at line 115 of file Molecule.cpp.

References mAtoms, mBonds, and mCycles.

const std::vector< ref<Bond> >& vl::Molecule::bonds ( ) const [inline]

Definition at line 95 of file Molecule.hpp.

Referenced by addBond(), bond(), eraseAllBonds(), eraseBond(), operator=(), setAromaticBondsColor(), and setBondRadii().

std::vector< ref<Bond> >& vl::Molecule::bonds ( ) [inline]

Definition at line 96 of file Molecule.hpp.

int vl::Molecule::bondCount ( ) const [inline]

Definition at line 98 of file Molecule.hpp.

Referenced by computeAtomAdjacency(), and incidentBonds().

Bond * Molecule::bond ( int index ) const

Definition at line 157 of file Molecule.cpp.

References mBonds.

Referenced by addBond(), bond(), computeAtomAdjacency(), eraseBond(), incidentBonds(), vl::RingExtractor::keepAromaticCycles(), and operator=().

Bond * Molecule::bond	(	Atom *	a1,
		Atom *	a2
	)

Definition at line 159 of file Molecule.cpp.

References vl::Bond::atom1(), vl::Bond::atom2(), bond(), and bonds().

void Molecule::addBond ( Bond * bond )

Definition at line 167 of file Molecule.cpp.

References bonds(), and prepareBondInsert().

Bond * Molecule::addBond	(	Atom *	a1,
		Atom *	a2
	)

Definition at line 147 of file Molecule.cpp.

References bond(), bonds(), vl::ref< T >::get(), and prepareBondInsert().

void Molecule::eraseBond ( Bond * bond )

Definition at line 173 of file Molecule.cpp.

References bond(), and bonds().

Referenced by eraseAtom(), and eraseBond().

void Molecule::eraseBond ( int bond )

Definition at line 185 of file Molecule.cpp.

References bonds().

void Molecule::eraseBond	(	Atom *	a1,
		Atom *	a2
	)

Definition at line 189 of file Molecule.cpp.

References vl::Bond::atom1(), vl::Bond::atom2(), bond(), and bonds().

void Molecule::eraseBond	(	int	a1,
		int	a2
	)

Definition at line 202 of file Molecule.cpp.

References atom(), and eraseBond().

void Molecule::eraseAllBonds ( )

Definition at line 187 of file Molecule.cpp.

References bonds().

void Molecule::computeAtomAdjacency ( )

Definition at line 204 of file Molecule.cpp.

References vl::Atom::adjacentAtoms(), atom(), vl::Bond::atom1(), vl::Bond::atom2(), atomCount(), bond(), and bondCount().

Referenced by vl::RingExtractor::bootstrap().

void Molecule::incidentBonds	(	std::vector< Bond * > &	inc_bonds,
		Atom *	atom
	)

Definition at line 215 of file Molecule.cpp.

References atom(), vl::Bond::atom1(), vl::Bond::atom2(), bond(), and bondCount().

Referenced by eraseAtom().

const std::vector< ref<Atom> >& vl::Molecule::cycle ( int i ) const [inline]

Returns the i-th cycle.

Definition at line 113 of file Molecule.hpp.

Referenced by vl::RingExtractor::keepAromaticCycles(), vl::RingExtractor::keepPlanarCycles(), operator=(), vl::RingExtractor::removeDoubles(), and vl::RingExtractor::sortCycles().

std::vector< ref<Atom> >& vl::Molecule::cycle ( int i ) [inline]

Returns the i-th cycle.

Definition at line 115 of file Molecule.hpp.

const std::vector< std::vector< ref<Atom> > >& vl::Molecule::cycles ( ) const [inline]

Returns the list of cycles.

Definition at line 118 of file Molecule.hpp.

Referenced by vl::RingExtractor::depthFirstVisit(), vl::RingExtractor::keepAromaticCycles(), vl::RingExtractor::keepMinimalCycles(), vl::RingExtractor::keepPlanarCycles(), vl::RingExtractor::removeDoubles(), and vl::RingExtractor::sortCycles().

std::vector< std::vector< ref<Atom> > >& vl::Molecule::cycles ( ) [inline]

Returns the list of cycles.

Definition at line 120 of file Molecule.hpp.

void Molecule::prepareForRendering ( )

Generates the geometry representing the current molecule, atom and bond settings.

The actors, geometry, and transforms generated by this function can be found in actorTree() and transformTree().

Definition at line 185 of file Molecule_rendering.cpp.

References vl::MS_AtomsOnly, vl::MS_BallAndStick, vl::MS_Sticks, and vl::MS_Wireframe.

const ActorTree* vl::Molecule::actorTree ( ) const [inline]

The ActorTree node containing the Actor[s] representing the molecule.

Definition at line 128 of file Molecule.hpp.

ActorTree* vl::Molecule::actorTree ( ) [inline]

The ActorTree node containing the Actor[s] representing the molecule.

Definition at line 130 of file Molecule.hpp.

void Molecule::setCPKAtomColors ( )

Sets all the atoms' color to their CPK color.

Definition at line 223 of file Molecule.cpp.

References vl::atomInfo(), atoms(), and vl::atomType().

void Molecule::setAtomColors ( const fvec4 & color )

Sets all the atoms' color to the specified color.

Definition at line 229 of file Molecule.cpp.

References atoms().

void Molecule::setCalculatedAtomRadii ( float percentage = 1.0f )

Sets all the atoms' radii to their calculated atom radii.

Definition at line 235 of file Molecule.cpp.

References vl::atomInfo(), atoms(), and vl::atomType().

void Molecule::setEmpiricalAtomRadii ( float percentage = 1.0f )

Sets all the atoms' radii to their empirical atom radii.

Definition at line 241 of file Molecule.cpp.

References vl::atomInfo(), atoms(), and vl::atomType().

void Molecule::setCovalentAtomRadii ( float percentage = 1.0f )

Sets all the atoms' radii to their covalent atom radii.

Definition at line 247 of file Molecule.cpp.

References vl::atomInfo(), atoms(), and vl::atomType().

void Molecule::setVanDerWaalsAtomRadii ( float percentage = 1.0f )

Sets all the atoms' radii to their van der Waals atom radii.

Definition at line 253 of file Molecule.cpp.

References vl::atomInfo(), atoms(), and vl::atomType().

void Molecule::setAtomRadii ( float radius )

Sets all the atoms' radii to the specified one.

Definition at line 259 of file Molecule.cpp.

References atoms().

void Molecule::setBondRadii ( float radius )

Sets all the bonds' radii to the specified one.

Definition at line 265 of file Molecule.cpp.

References bonds().

void Molecule::setAtomTypeVisible	(	EAtomType	type,
		bool	visible
	)

Definition at line 271 of file Molecule.cpp.

References atom(), atoms(), vl::Atom::atomType(), and vl::Atom::setVisible().

void vl::Molecule::setMoleculeStyle ( EMoleculeStyle style ) [inline]

The rendering style of the molecule.

Definition at line 153 of file Molecule.hpp.

EMoleculeStyle vl::Molecule::moleculeStyle ( ) const [inline]

The rendering style of the molecule.

Definition at line 155 of file Molecule.hpp.

void vl::Molecule::setAtomDetail ( int detail ) [inline]

Geometrical detail used to render the atoms, usually between 0 and 3 (default is 2)

Definition at line 158 of file Molecule.hpp.

int vl::Molecule::atomDetail ( ) const [inline]

Geometrical detail used to render the atoms, usually between 0 and 3 (default is 2)

Definition at line 160 of file Molecule.hpp.

void vl::Molecule::setBondDetail ( int detail ) [inline]

Geometrical detail used to render the bonds, usually between 5 and 50 (default is 20)

Definition at line 163 of file Molecule.hpp.

int vl::Molecule::bondDetail ( ) const [inline]

Geometrical detail used to render the bonds, usually between 5 and 50 (default is 20)

Definition at line 165 of file Molecule.hpp.

float vl::Molecule::ringOffset ( ) const [inline]

Definition at line 167 of file Molecule.hpp.

void vl::Molecule::setRingOffset ( float offset ) [inline]

Definition at line 168 of file Molecule.hpp.

void Molecule::setAromaticBondsColor ( const fvec4 & color )

Definition at line 278 of file Molecule.cpp.

References bonds(), and vl::BT_Aromatic.

void vl::Molecule::setAromaticRingColor ( const fvec4 & color ) [inline]

Definition at line 171 of file Molecule.hpp.

const fvec4& vl::Molecule::aromaticRingColor ( ) const [inline]

Definition at line 172 of file Molecule.hpp.

float vl::Molecule::lineWidth ( ) const [inline]

Definition at line 174 of file Molecule.hpp.

bool vl::Molecule::smoothLines ( ) const [inline]

Definition at line 175 of file Molecule.hpp.

void vl::Molecule::setLineWidth ( float w ) [inline]

Definition at line 177 of file Molecule.hpp.

void vl::Molecule::setSmoothLines ( bool smooth ) [inline]

Definition at line 178 of file Molecule.hpp.

Transform* vl::Molecule::transformTree ( ) [inline]

The transform tree used by the generated bonds, atoms and labels.

Definition at line 181 of file Molecule.hpp.

const Transform* vl::Molecule::transformTree ( ) const [inline]

The transform tree used by the generated bonds, atoms and labels.

Definition at line 183 of file Molecule.hpp.

Text* vl::Molecule::atomLabelTemplate ( ) [inline]

The text settings to be used to render the atom labels.

Definition at line 186 of file Molecule.hpp.

const Text* vl::Molecule::atomLabelTemplate ( ) const [inline]

The text settings to be used to render the atom labels.

Definition at line 188 of file Molecule.hpp.

void vl::Molecule::setShowAtomNames ( bool show ) [inline]

Globally defines whether the atom names should be rendered or not. See also Atom::setShowAtomName().

Definition at line 191 of file Molecule.hpp.

bool vl::Molecule::showAtomNames ( ) const [inline]

Globally defines whether the atom names should be rendered or not. See also Atom::setShowAtomName().

Definition at line 193 of file Molecule.hpp.

const Effect* vl::Molecule::atomLabelEffect ( ) const [inline]

The Effect used to render the atom labels.

Definition at line 196 of file Molecule.hpp.

Effect* vl::Molecule::atomLabelEffect ( ) [inline]

The Effect used to render the atom labels.

Definition at line 198 of file Molecule.hpp.

void vl::Molecule::prepareAtomInsert ( int bonus = 100 ) [inline, protected]

Definition at line 201 of file Molecule.hpp.

Referenced by addAtom().

void vl::Molecule::prepareBondInsert ( int bonus = 100 ) [inline, protected]

Definition at line 206 of file Molecule.hpp.

Referenced by addBond().

void Molecule::wireframeStyle ( ) [protected]

Definition at line 245 of file Molecule_rendering.cpp.

References vl::Bond::atom1(), vl::Bond::atom2(), vl::Atom::color(), vl::Bond::color(), vl::Atom::coordinates(), vl::EN_BLEND, vl::EN_DEPTH_TEST, vl::EN_LINE_SMOOTH, vl::ref< T >::get(), vl::PT_LINES, vl::Bond::useAtomColors(), vl::Atom::visible(), and vl::Bond::visible().

void Molecule::atomsStyle ( ) [protected]

Definition at line 304 of file Molecule_rendering.cpp.

References vl::ref< T >::get(), and vl::Matrix4< float >::getTranslation().

void Molecule::ballAndStickStyle ( ) [protected]

Definition at line 324 of file Molecule_rendering.cpp.

References vl::Bond::atom1(), vl::Bond::atom2(), vl::CC_NoCap, vl::Atom::color(), vl::Bond::color(), vl::Atom::coordinates(), vl::EN_CULL_FACE, vl::EN_DEPTH_TEST, vl::EN_LIGHTING, vl::ref< T >::get(), vl::Matrix4< float >::getRotation(), vl::Matrix4< float >::getTranslation(), vl::length(), vl::normalize(), vl::Bond::radius(), and vl::Bond::useAtomColors().

void Molecule::sticksStyle ( ) [protected]

Definition at line 381 of file Molecule_rendering.cpp.

References vl::Bond::atom1(), vl::Bond::atom2(), vl::CC_RoundedCap, vl::Atom::color(), vl::Bond::color(), vl::Atom::coordinates(), vl::EN_CULL_FACE, vl::EN_DEPTH_TEST, vl::EN_LIGHTING, vl::ref< T >::get(), vl::Matrix4< float >::getRotation(), vl::Matrix4< float >::getTranslation(), vl::length(), vl::normalize(), vl::Bond::radius(), and vl::Bond::useAtomColors().

void Molecule::generateRings ( ) [protected]

Definition at line 421 of file Molecule_rendering.cpp.

References vl::AABB::center(), vl::EN_DEPTH_TEST, vl::ref< T >::get(), vl::normalize(), and vl::PT_LINES.

void Molecule::generateAtomLabels ( ) [protected]

Definition at line 235 of file Molecule_rendering.cpp.

References vl::ref< T >::get(), and vl::Matrix4< float >::getTranslation().

void Molecule::generateAtomLabel	(	const Atom *	atom,
		Transform *	tr
	)		`[protected]`

Definition at line 201 of file Molecule_rendering.cpp.

References vl::Atom::atomName(), vl::ref< T >::get(), vl::Atom::showAtomName(), and vl::Atom::visible().

Member Data Documentation

fvec4 vl::Molecule::mAromaticRingColor [protected]

Definition at line 220 of file Molecule.hpp.

Referenced by operator=(), and reset().

ref<ActorTree> vl::Molecule::mActorTree [protected]

Definition at line 221 of file Molecule.hpp.

Referenced by reset().

ref<Transform> vl::Molecule::mTransformTree [protected]

Definition at line 222 of file Molecule.hpp.

std::vector< ref<Atom> > vl::Molecule::mAtoms [protected]

Definition at line 223 of file Molecule.hpp.

Referenced by atom(), eraseAllAtoms(), and reset().

std::vector< ref<Bond> > vl::Molecule::mBonds [protected]

Definition at line 224 of file Molecule.hpp.

Referenced by bond(), eraseAllAtoms(), and reset().

std::vector< std::vector< ref<Atom> > > vl::Molecule::mCycles [protected]

Definition at line 225 of file Molecule.hpp.

Referenced by eraseAllAtoms(), operator=(), and reset().

String vl::Molecule::mMoleculeName [protected]

Definition at line 226 of file Molecule.hpp.

Referenced by operator=(), and reset().

ref<KeyValues> vl::Molecule::mTags [protected]

Definition at line 227 of file Molecule.hpp.

Referenced by operator=().

ref<Text> vl::Molecule::mAtomLabelTemplate [protected]

Definition at line 228 of file Molecule.hpp.

ref<Effect> vl::Molecule::mAtomLabelEffect [protected]

Definition at line 229 of file Molecule.hpp.

Referenced by Molecule().

unsigned int vl::Molecule::mId [protected]

Definition at line 230 of file Molecule.hpp.

Referenced by reset().

EMoleculeStyle vl::Molecule::mMoleculeStyle [protected]

Definition at line 231 of file Molecule.hpp.

Referenced by operator=(), and reset().

int vl::Molecule::mAtomDetail [protected]

Definition at line 232 of file Molecule.hpp.

Referenced by operator=(), and reset().

int vl::Molecule::mBondDetail [protected]

Definition at line 233 of file Molecule.hpp.

Referenced by operator=(), and reset().

float vl::Molecule::mRingOffset [protected]

Definition at line 234 of file Molecule.hpp.

Referenced by operator=(), and reset().

float vl::Molecule::mLineWidth [protected]

Definition at line 235 of file Molecule.hpp.

Referenced by operator=(), and reset().

bool vl::Molecule::mSmoothLines [protected]

Definition at line 236 of file Molecule.hpp.

Referenced by operator=(), and reset().

bool vl::Molecule::mShowAtomNames [protected]

Definition at line 237 of file Molecule.hpp.

Referenced by reset().

The documentation for this class was generated from the following files:

D:/VL/BuildSystem/VL_DISTRO/Visualization_Library_SDK/src/vlMolecule/Molecule.hpp
D:/VL/BuildSystem/VL_DISTRO/Visualization_Library_SDK/src/vlMolecule/Molecule.cpp
D:/VL/BuildSystem/VL_DISTRO/Visualization_Library_SDK/src/vlMolecule/Molecule_rendering.cpp

Visualization Library

vl::Molecule Class Reference

Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation